Biology and Terror

(Updated 28 January 2015)

Anthrax (Bacillus anthracis)

An aside on antibiotic prophylaxis and treatment

Antibiotics: Prophylaxis or Treatment?

Antibiotic Resistant Bacteria

  • Analogy of the armor-piercing shells and the tanks
    • Moral: beware of the single exception
  • Analogy of the Hannibal and the elephants
    • Moral: it only works once

Vaccines: Prophylaxis or Treatment?

  • Timing and vaccination
    • Takes time for vaccines to “take”
      • Differs for different vaccines
      • Sometimes partial protection
  • Need to know the enemy in advance
    • Partial resistance usually defends against vaccine resistance
    • But smallpox vs. HIV

Bacillus anthracis

  • Cause of anthrax
  • Found in soil
  • Pathogenic for grazing animals
  • Humans get if from animals (or from intentional inoculation)
  • B. anthracis makes spores that are very hardy survivors

Spores

  • Designed for survival
  • Non-growing (dormant) state
  • Very little water
  • Hard outer shell
  • Smaller than growing cells
  • If a cell is a cocktail sausage, a spore is a marble

Spores are very resistant

  • British germ warfare experiment 1942
  • Gruinard Island (Coast of Scotland)
  • Spores active for decades
  • Decontaminated by spraying 280 tons of formaldehyde diluted in 2000 tons of seawater (1986 — declared “safe” in 1990)
  • Spores are known to be active even 100 years later! (medieval hospital site)

Pathology of Anthrax

  • Three routes of infection
    • Skin contact (scratches)
    • Ingestion (eating) — rare in developed world
      • Eating undercooked meat from infected animals
    • Inhalation (breathing)
  • Inhalation and ingestion are the worst

Human Anthrax (historical)

  • Skin anthrax from handling infected animals and wool
  • “Woolsorters disease” from breathing dust form wool
  • Both were bad

Conquest of Anthrax

  • Robert Koch (started as country doctor)
    • Identified bacillus — first one ever
    • Basic science approach
  • Louis Pasteur (started as a chemist)
    • Made vaccine
      • “attenuated strain”
    • Not a physician

Robert Koch

  • Koch’s postulates
    • Germ present in all with disease and none without
    • Germ grown in culture causes disease
    • Germ isolated from inoculated (and diseased) causes disease in another
  • Father of microbiology

Human Anthrax (modern)

  • Before 2002
    • Antibiotic treatment effective 90% for skin anthrax
    • But only 10% for inhalation anthrax
  • After 2002
    • Almost 100% effective for skin anthrax
    • About 50% for inhalation anthrax

Effective weapons

  • Large spores (or clumps) ineffective
    • Filtered by nose and throat
    • Expelled by mucus escalator and ciliary sweeping
  • Small spores
    • Trapped in small sacs in lungs
    • Grow and develop

How anthrax works

  • Spores break out of dormancy and start growing
  • If outside of cells (e.g. in lungs) grow and make a capsule and two toxins

Capsule

  • “Capsule” is a fancy name for “slime coat”
  • Make it hard for phagocyte to capture cells
  • Genes for capsule are on an extra piece of DNA called a plasmid
  • If no slime, cells are eaten before they can cause damage

Toxins

  • LF or Lethal Factor (kills mice)
  • EF or Edema Factor (causes fluid accumulation)
  • PA or “Protective antigen” (Definite misnomer!)
    • Delivers the other two toxins to the cells
    • Really the Trojan horse of the system

PA: The “Trojan Horse”

  • PA, LF, and EF excreted by cells, but diluted
  • If in phagocyte, all are concentrated
  • “PA” makes a hole in the membrane

Corrupting the Defenses

  • LF and EF sit on top of the hole
  • When lysosome fuses, something happens and LF and EF are transported through the hole
  • That kills the cell and lets the germs grow and thrive
  • Cell ruptures and more are released

Cause of Death

  • Needs lots of cells — often enough to “clog the plumbing”
  • But death caused by too much toxin, not clogging.
  • After death, bacteria thrive on rotting flesh until none left
  • Then they convert to dormant spores to wait for next victim

Anthrax as bioterrorism

  • Well publicized attacks via US Mail in 2001 (after 9/11)
    • 23 cases, 12 cutaneous, 11 inhalation, 5 deaths
  • Sporadic scares of white powder sent to people
    • Most are something harmless

What makes bioterror effective? Bio or Terror?

  • What do we fear?
  • Define risk
    • Probability of occurrence
    • Probability of death
  • Longterm effects (e.e. 9/11/2001)

Ebola Hemorrhagic Fever

  • Ebola is an RNA virus
  • Attacks cells lining the blood vessels (sepsis)
  • Blood vessels leak out, heart cannot pump blood to organs
  • Organs die (septic shock)

Clinical features of Ebola

  • Start with flu-like symptoms
  • Then stomach and chest pain
  • Then blindness or bleeding from orfices
  • Very lethal (70-90% in Africa but still 50% in the best western hospitals)

Subtypes of Ebola differ by region

  • First seen in 1970
  • Four subtypes cause human disease (so far)
  • One subtype (Ebola Reston) causes disease in non-human primates
    • Book: Hot Zone
    • Transmission to humans, but no disease
  • Marburg virus is related to Ebola virus

Transmission

  • Non-infectious until first symptoms
    • Fever is first (before infectious)
  • Direct contact with blood, secretions, organs, or semen
    • Even after death
    • Funeral practices are one source of contagion
  • Infectivity persists for days after recovery, but even 7 weeks in semen

Prevention and treatment

  • No treatment available (supportive therapy only)
  • Prevention by isolation and barrier precautions

Natural reservoir (where does it come from?)

  • Somewhere in the rain forests of Africa
  • Non-human primates can cause some outbreaks
    • But not likely a reservoir — they also die quickly
  • Recent theory: bats
    • They are infected but don’t die
    • Good candidate for maintaining the virus

Ebola Reston Virus

  • 1989 discovery in macaques imported from Phillipines to a facility in Reston Virginia
  • Other outbreaks in the 1990’s
  • Ebola-like symptoms in monkeys
  • At least 12 humans infected (US and Phillipines)
    • No clinical symptoms, but antibodies present
  • Scariest news: Ebola Reston is transmitted airborne
    • Human Ebola is not (so far)
  • Newest twist: Ebola Reston found in pigs
    • Pigs are a lot like humans in terms of infectious disease
    • Again, human infection (antibodies) but no disease

Bioterror(ism)

What makes a good bioweapon?

  • Highly infectious
  • Cause death or incapacitation
  • Easily dispersed
  • Easily grown in large quantities
  • Stable in storage
  • Resistant to environment (till infection)
  • Resistant to treatment (by enemy)
  • Cure or vaccine available (for self — so affect only the enemy)

Yes, the vaccine is the real weapon

  • USSR and smallpox eradication story
  • USSR produced nearly all the vaccine — huge capacity for smallpox vaccine
  • Vaccine production limited in western countries

Would Ebola or Anthrax make a good bioweapon?

  • What about other candidates in this course?