Data & Resources

Making our data publicly available and accessible is a priority for the Geomicrobiology Lab.

Great Lakes Atlas of Multi-omics Research (GLAMR)

We are collecting and standardizing publicly available omics data and associated metadata from the Laurentian Great Lakes to increase its value and utility by making it more standardized, accessible, and approachable. Standardized data products from our bioinformatics pipelines will be accessible via our Great Lakes Atlas of Multi-omics Research (GLAMR) website. With the GLAMR website, users can find and explore omics datasets from the Great Lakes in the context of available nutrient and physical conditions. GLAMR currently contains omics data from amplicon, metagenomic, and metatranscriptomic sequencing projects.

We are always looking to expand the datasets available via GLAMR. If you have sequencing data you’d like to submit, please contact us at GLAMR-omics@umich.edu.


Western Lake Erie Culture Collection (WLECC)


StrainDB

Coming soon! We are curating a database of all microorganisms we have isolated from the Laurentian Great Lakes. We hope to make this data publicly available soon.


External Databases

JGI

Project:

  • Data product

NCBI

Project:

  • Data product