Sequence alignments:
Alignments of 6 genes from 199 fungal taxa used in AFTOL paper. Nature 443: 818-822 (zip file of alignments)

Alignment of ribosomal RNA (18S+28S+5.8S) of Chytridiomycete fungi used in Deep Hypha issue. Mycologia 98: 860-871 (nexus file)

Alignment of ribosomal RNA (18S+28S+5.8S) of Zygomycete fungi used in Deep Hypha issue. Mycologia98: 872-884 (nexus file)

Alignment of ITS sequences from Batrachochytrium dendrobatidis used in Schloegel et al. (2012), Mol. Ecol. 21: 5162 (nexus file)

Alignment of 53 proteins including Paramicrosporidium saccamoebae used in Quandt et al. (2017), in review (zipped protein alignments in fasta) 


Multilocus genotypes:
Multilocus sequence typing scheme and data set of 59 global Batrachochytrium dendrobatidis isolates used in PLoS Pathog. 5: e1000458. (nexus file)

Multilocus sequence typing scheme and data set of 45 Batrachochytrium dendrobatidis isolates used in Schloegel et al. (2012), Mol. Ecol. 21: 5162. (Genepop file)

Multilocus microsatellite genotypes used in Malloure & James (2013), Heredity 110:355. (Genepop file)

Multilocus sequence typing scheme and data set of 71 Batrachochytrium dendrobatidis isolates used in Shaw et al. (2014), J. Wildlife Dis. 50: 723-732. LeKV is NZ isolate. (Nexus file)


Genome assemblies:
Leucoagaricus (JSC050730-01) genome data

Cyathus stercoreus (CS4.14) genome assembly (fasta file)


Population Genetics of Microbes Workshop, Beijing 2013

Fasta sequences of MAT proteins


Chytrid Single cell Phylogeny 18S:
Dynamic 18S tree with images combining single cells, environmental DNA, and cultures from Seto et al. A combined microscopy and single-cell sequencing approach, mBio 2023

Alignments and trees from Seto et al. 2023: link to figshare folder